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Whole Genome Analysis and Assessment of the Metabolic Potential of Gordonia rubripertincta Strain 112, a Degrader of Aromatic and Aliphatic Compoundsстатья
Статья опубликована в высокорейтинговом журнале
Информация о цитировании статьи получена из
Scopus
Статья опубликована в журнале из списка Web of Science и/или Scopus
Дата последнего поиска статьи во внешних источниках: 1 мая 2024 г.
- Авторы: Frantsuzova Ekaterina, Bogun Alexander, Solomentsev Viktor, Vetrova Anna, Streletskii Rostislav, Solyanikova Inna, Delegan Yanina
- Журнал: Biology
- Том: 12
- Год издания: 2023
- Издательство: MDPI Publishing
- Местоположение издательства: Basel, Switzerland, Switzerland
- Первая страница: 1
- Последняя страница: 17
- Номер статьи: 721
- DOI: 10.3390/biology12050721
- Аннотация: The application of Gordonia strains in biotechnologies of environmental purification asdegraders of pollutants of different chemical structures is an interesting research topic. The strainGordonia rubripertincta 112 (IEGM112) is capable of utilizing diesel fuel, alkanes, and aromatic compounds. The aim of this work was to study the potential of G. rubripertincta 112 as a degrader ofaromatic and aliphatic compounds and analyze its complete genome in comparison with other knownG. rubripertincta strains. The genome had a total length of 5.28 Mb and contained 4861 genes in total,of which 4799 were coding sequences (CDS). The genome contained 62 RNA genes in total, of which50 were tRNAs, three were ncRNAs, and nine were rRNAs. The strain bears plasmid elementswith a total length of 189,570 nucleotides (plasmid p1517). The strain can utilize 10.79 ± 1.17% ofhexadecane and 16.14 ± 0.16% of decane over 3 days of cultivation. In the genome of the strain, wehave found metabolic pathways of alkane (cytochrome P450 hydroxylases) and catechol (ortho- andmeta-pathways) degradation. These results will help us to further approach the fundamental studyof the processes occurring in the strain cells and to enrich our knowledge of the catabolic capabilitiesof G. rubripertincta.
- Добавил в систему: Стрелецкий Ростислав Александрович
Прикрепленные файлы
| № | Имя | Описание | Имя файла | Размер | Добавлен |
|---|---|---|---|---|---|
| 1. | Полный текст | biology-12-00721.pdf | 4,5 МБ | 16 мая 2023 [Streletskiy] |