Evaluation of classical correlation functions from 2/3D images on CPU and GPU architectures: Introducing CorrelationFunctions.jl

Postnicov, V.; Samarin, A.; Karsanina, M.V.; Gravey, M.; Khlyupin, A.; Gerke, K.M.

Авторы: Postnicov Vasily, Samarin Aleksei, Karsanina Marina V., Gravey Mathieu, Khlyupin Aleksey, Gerke Kirill M.
Журнал: Computer Physics Communications
Том: 299
Год издания: 2024
Издательство: Elsevier BV
Местоположение издательства: Netherlands
Номер статьи: 109134
DOI: 10.1016/j.cpc.2024.109134
Аннотация: Correlation functions are becoming one of the major tools for quantification of structural information that is usually represented as 2D or 3D images. In this paper we introduce Image 1 open-source package developed in Julia and capable of computing all classical correlation functions based on imaging input data. Images include both binary and multi-phase representations. Our code is capable of evaluating two-point probability , phase cross-correlation , cluster , lineal-path , surface-surface , surface-void , pore-size P and chord-length p distribution functions on both CPU and GPU architectures. Where possible, we presented two types of computations: full correlation map (correlations of each point with other points on the image, that also allows obtaining ensemble averaged CF) and directional correlation functions (currently in major orthogonal and diagonal directions). Such an implementation allowed for the first time to assemble a completely free solution to evaluate correlation functions under any operating system with well documented application programming interface (API). Our package includes automatic tests against analytical solutions that are described in the paper. We measured execution times for all CPU and GPU implementations and as a rule of thumb full correlation maps on GPU are faster than other methods. However, full maps require more RAM and, thus, are limited to available RAM resources. On the other hand, directional CFs are memory efficient and can be evaluated for huge datasets – this way they are the first candidates for structural data compression of feature extraction. The package itself is available through Julia package ecosystem and on GitHub, the latter source also contains documentation and additional helpful resources such as tutorials. We believe that a single powerful computational tool such as Image 1 presented in this paper will significantly facilitate the usage of correlation functions in numerous areas of structural description and research of porous materials, as well as in machine learning applications. We also present some examples as applied to ceramic, soil composite and oil-bearing rock samples based on their 3D X-ray tomography and 2D scanning electron microscope images. Finally, we conclude our paper with discussion of possible ways to further improve presented computational framework.
Добавил в систему: Герке Кирилл Миронович

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Evaluation of classical correlation functions from 2/3D images on CPU and GPU architectures: Introducing CorrelationFunctions.jlстатья

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